Package: bubbleHeatmap 0.1.1

bubbleHeatmap: Produces 'bubbleHeatmap' Plots for Visualising Metabolomics Data

Plotting package based on the grid system, combining elements of a bubble plot and heatmap to conveniently display two numerical variables, (represented by color and size) grouped by categorical variables on the x and y axes. This is a useful alternative to a forest plot when the data can be grouped in two dimensions, such as predictors x outcomes. It has particular advantages for visualising the metabolic measures produced by the 'Nightingale Health' metabolomics platform, and templates are included for automatically generating figures from these datasets.

Authors:Ruth Boxall [aut, cre], Michael Holmes [ctb], Robin Walters [ctb]

bubbleHeatmap_0.1.1.tar.gz
bubbleHeatmap_0.1.1.zip(r-4.5)bubbleHeatmap_0.1.1.zip(r-4.4)bubbleHeatmap_0.1.1.zip(r-4.3)
bubbleHeatmap_0.1.1.tgz(r-4.4-any)bubbleHeatmap_0.1.1.tgz(r-4.3-any)
bubbleHeatmap_0.1.1.tar.gz(r-4.5-noble)bubbleHeatmap_0.1.1.tar.gz(r-4.4-noble)
bubbleHeatmap_0.1.1.tgz(r-4.4-emscripten)bubbleHeatmap_0.1.1.tgz(r-4.3-emscripten)
bubbleHeatmap.pdf |bubbleHeatmap.html
bubbleHeatmap/json (API)

# Install 'bubbleHeatmap' in R:
install.packages('bubbleHeatmap', repos = c('https://ruthckb.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • cetp - Associations of Nightingale Health Metabolomics Panel with a Cholesterol Esterase Transfer Protein Genetic Risk Score in China Kadoorie Biobank
  • ntngale225 - Nightingale Health Metabolomics Plot Template Format
  • ntngale249 - Nightingale Health Metabolomics Plot Template Format

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

13 exports 1 stars 0.09 score 3 dependencies 2 scripts 284 downloads

Last updated 1 years agofrom:3ccec49c6c. Checks:OK: 3 NOTE: 4. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 07 2024
R-4.5-winNOTESep 07 2024
R-4.5-linuxNOTESep 07 2024
R-4.4-winNOTESep 07 2024
R-4.4-macNOTESep 07 2024
R-4.3-winOKSep 07 2024
R-4.3-macOKSep 07 2024

Exports:arrangePanelsbubbleHeatmapbubbleHeatmapListbubbleHMLegendscombinePanelsformatDatagetLayoutSizesmatchLayoutHeightsmatchLayoutWidthsmerge_templatemetabFiguremetabFigurePlotmultiPlotInput

Dependencies:plyrRcppreshape

Using bubbleHeatmap to Plot Nightingale Metabolomics Data

Rendered fromUsing_Bubbleheatmap.Rmdusingknitr::rmarkdownon Sep 07 2024.

Last update: 2023-05-15
Started: 2023-02-17